13.9 Amino Acids and Proteins

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A-Level Chemistry (F334) Flashcards on 13.9 Amino Acids and Proteins, created by sonia-u on 11/28/2015.
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Question Answer
What do Amino Acids contain? One Amino group and one carboxylic group.
What are bifunctional compounds? Compounds with two functional groups.
Which functional group is proton donating? -COOH (Carboxylic Acid)
Which one is proton accepting? -NH2 (Amino Group)
What are Zwitterions? Particles containing both negatively charged and positively charged groups. (Single molecule containing both + and -)
How do Amino Acids form Zwitterions? By the two functional groups reacting with each other.
What do an aqueous solution of an amino acid mainly consist of? Zwitterions as amino acids are very soluble in water because they are ionic.
Why might an amino acid not be ionic in water? If it has an extra -COOH or -NH2 group in the molecule.
What do small quantities of acid or alkali to an amino acid solution do? It causes little change to the pH because the zwitterions neutralise the effect of addition.
What are buffer solutions? Solututions which can withstand the addition of small amounts of acid or alkali.
What is formed when NH2 reacts with the -COOH? A secondary amide group.
When a secondary amide group is formed what molecule is eliminated? Water therefore it is a condensation reaction.
What is formed when two amino acids are joined together? A secondary amide is formed called a peptide link.
What is a polypeptide? 3 or more amino acids joined together.
What is the primary structure? The order in which the amino aids are joined to one another.
What four interactions are in chain folding? 1. Instantaneous dipole-induced dipole bonds between non-polar side chains. 2. Hydrogen bonds between polar side chains. 3. Ionic bonds between ionisable side chains. 4. Covalent bonding.
What are the two ways a protein can be arranged as a result of folding and twisting from hydrogen bonding? 1. Helix=Tightly coiled where the C=O group of one peptide link from a hydrogen bond to a N-H group four peptide links along the chain. 2. Sheet where the extended chains line alongside each other.
What are the helix and sheet also known as? The secondary structure.
What happens when chains fold up further? A tertiary structure forms where the instantaneous diple-induced dipole attractive forces, H bonding + ionic attractions + covalent bonding.
What can do done to release individual amino acids? Peptide links can be hydrolysed.
How is Hydrolysis carried out? By heating with moderately concetrated alkali or acid to hydrolyse the C-N bond. It is hydrolysd under reflux.
How does hydrolysis of proteins happen in living organisms? By enzymes rather than acid or alkali.
What technique can be used to identify the individual amino acids present in a peptide? Paper chromatography where the sample product can be compared to known samples of pure amino acids.
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