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BLAST

Description

Year 2 Flashcards on BLAST, created by gina_evans0312 on 28/12/2013.

Flashcards by gina_evans0312, updated more than 1 year ago

	Created by gina_evans0312 over 10 years ago

444

Resource summary

Question	Answer
BLAST	Uses 'words' instead of singly aa/bp to compare sequences
BLAST N	Uses nucleotides
BLAST P	Protein Sequences
PSIBLAST	Position Specific Iterated Blast- useful for different homologues
BLASTX	Six frame translations of a nucleotide sequence- useful when reading frame is unknown
TBLASTN	Six frame translations of a protein sequence
TBLASTX	Takes nucleotide sequence, converts it into all 6 frames and compares them to 6 frame shifted sequences

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