Protein Structure Pt. 1

Descripción

(Basics) Structural Basis for Biological Function Test sobre Protein Structure Pt. 1, creado por gina_evans0312 el 21/09/2013.
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Test por gina_evans0312, actualizado hace más de 1 año
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2

Resumen del Recurso

Pregunta 1

Pregunta
Which type of protein is conjugated?
Respuesta
  • One that contains only amino acid residues
  • One that contains prosthetic groups
  • One that is bound to a membrane

Pregunta 2

Pregunta
Which of the following means a protein with two identical subunits?
Respuesta
  • Heteromultimer
  • Homomonomer
  • Homomultimer

Pregunta 3

Pregunta
Which of the following proteins types tend to have various roles, as opposed to a single, defined one?
Respuesta
  • Fibrous
  • Globular
  • Membrane

Pregunta 4

Pregunta
Which of the following tend not to be water soluble?
Respuesta
  • Fibrous
  • Globular
  • Membrane spanning

Pregunta 5

Pregunta
What secondary structures tend to make up fibrous proteins?
Respuesta
  • Long strands
  • Long sheets
  • Short strands

Pregunta 6

Pregunta
What is specific about the membrane spanning part of membrane proteins?
Respuesta
  • They are hydrophobic
  • They are hydrophillic

Pregunta 7

Pregunta
Define 'Domain' in reference to protein structure
Respuesta
  • Independent folding units of the tertiary structure that have independent functions
  • Independent folding units of tertiary structure that have related functions
  • Dependent folding units of secondary structure that have relation functions
  • Dependent folding units of tertiary structure that have related functions

Pregunta 8

Pregunta
Define subunit
Respuesta
  • Independent structures in a quaternary structure
  • Independent structures in a tertiary structure
  • Dependent subunits in a quaternary structure

Pregunta 9

Pregunta
What can be the result of a single amino acid mutation in collagen?
Respuesta
  • Osteoarthritis
  • Osteogenesis imperfecta
  • Osteocalcification

Pregunta 10

Pregunta
What is Resonance (as pertaining to protein structure)?
Respuesta
  • Where bond pairs cannot be described as a single Lewis Diagram
  • Where two atoms in separate molecules cause each other to vibrate
  • Where two atoms in separate molecules are more likely to bond to each other than to another atom

Pregunta 11

Pregunta
Which is the psi bond?
Respuesta
  • Between the carbonyl carbon and the alpha carbon
  • Between the alpha carbon and the amide group
  • Between the alpha carbon and the R group

Pregunta 12

Pregunta
Which is the phi bond?
Respuesta
  • Between the alpha carbon and the amide group
  • Between the alpha carbon and the carbonyl carbon
  • Between the alpha carbon and the R group

Pregunta 13

Pregunta
What is Steric clashing?
Respuesta
  • Where the charge of an atom prevents it from being close to another
  • Where the electron arrangement of an atom prevents it from being close to another
  • Where the size of an atom prevents it from being close to another

Pregunta 14

Pregunta
Why is a peptide bond planar?
Respuesta
  • It has a double bond like structure
  • It's electrons clash with that of the psi bond
  • It's electrons clash with the phi bond

Pregunta 15

Pregunta
How many residues per turn in an alpha helix?
Respuesta
  • 3.4
  • 3.5
  • 3.6

Pregunta 16

Pregunta
How much does an alpha helix rise per aa?
Respuesta
  • 1.5 angstroms
  • 1.6 angstroms
  • 1.7 angstroms

Pregunta 17

Pregunta
Alpha helices are stabilised by hydrogen bonding with what groups?
Respuesta
  • Carbonyl oxygen 4 amino acids away
  • Carbonyl oxygen 6 amino acids away
  • Carbonyl oxygen 8 amino acids away

Pregunta 18

Pregunta
The stabilising effect of the hydrogen bonds makes a loop of how many atoms?
Respuesta
  • 12
  • 13
  • 14

Pregunta 19

Pregunta
Which of the following destabilize an alpha helix?
Respuesta
  • Glycine
  • Proline
  • Leucine
  • Glutamic acid

Pregunta 20

Pregunta
Beta sheets rise by 3.47A per residue in anti-parallel sheets
Respuesta
  • True
  • False

Pregunta 21

Pregunta
In parallel sheets, there is a rise of .... per residue
Respuesta
  • 3.25A
  • 4.25A
  • 2.25A

Pregunta 22

Pregunta
3 residues per turn of the strand are pictured as a helix
Respuesta
  • True
  • False

Pregunta 23

Pregunta
Anti-parallel strands are _ stable than parallel ones
Respuesta
  • More
  • Less

Pregunta 24

Pregunta
Side chains all point the same way (in the plane of the sheet)
Respuesta
  • True
  • False

Pregunta 25

Pregunta
What is the role of loops?
Respuesta
  • Connecting alpha and beta sheets
  • Connecting alpha helices and alpha helices
  • Connecting beta sheets and beta sheets

Pregunta 26

Pregunta
Loops contain mostly hydrophillic residues & are found on the protein surface
Respuesta
  • True
  • False

Pregunta 27

Pregunta
What is the role of beta turns?
Respuesta
  • To allow beta sheets to reverse direction
  • To connect beta sheets together
  • To link protein subunits together

Pregunta 28

Pregunta
What two amino acids cannot be contained within a beta sheet?
Respuesta
  • Proline
  • Argenine
  • Glycine
  • Valine

Pregunta 29

Pregunta
Beta turns link the oxygen of the carbonyl group and the hydrogen of the nitrile group 4 residues away
Respuesta
  • True
  • False

Pregunta 30

Pregunta
Levinthals Paradox- if a protein folded by trying each fold in a sequence, it would take an impossibly long time to fold correctly. Therefore, protein folding cannot be random or sequential
Respuesta
  • True
  • False

Pregunta 31

Pregunta
What is this?
Respuesta
  • The energy change as proteins fold
  • Gibbs free energy
  • Entropy change

Pregunta 32

Pregunta
Why are the internal interactions of protein folding unfavorable?
Respuesta
  • It decreases entropy
  • They're hydrophobic in a hydrophillic environment
  • They prevent the protein from folding correctly

Pregunta 33

Pregunta
Non-covalent and hydrophobic effects (which effects free water) decrease enthalpy
Respuesta
  • True
  • False

Pregunta 34

Pregunta
Change in energy during folding = Internal interactions - (Hydrophobic effect + conformational entropy)
Respuesta
  • True
  • False

Pregunta 35

Pregunta
Proteins fold towards configurations with the...
Respuesta
  • lowest energy
  • Highest energy
  • Easiest energy to reach (energy closest to that of unfolded protein)

Pregunta 36

Pregunta
What can slow the progress of protein folding?
Respuesta
  • A local low energy minimum
  • A local high energy minimum

Pregunta 37

Pregunta
What is nucleation?
Respuesta
  • Reversible secondary structure formation
  • Reversible tertiary structure formation
  • Reversible quaternary structure formation

Pregunta 38

Pregunta
Which of the following happens after nucleation?
Respuesta
  • The secondary structure aggregation forms a molten globular intermediate
  • Domains adjust to the lowest energy form

Pregunta 39

Pregunta
The protein is capable of conformational change after forming
Respuesta
  • True
  • False
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