BMS07-1030- Amino Acid and Protein Metabolism

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biochemical basis for describing an amino acid as “essential”. terms protein turnover and nitrogen balance. common causes of negative and positive nitrogen balance. the pathways of protein degradation, including ubiquitin-dependent proteolysis. key biochemical pathways involved in amino acid metabolism and nitrogen disposal. processes of transamination and deamination and explain the term trans-deamination alanine, glutamate and glutamine importance
Evian Chai
Flashcards by Evian Chai, updated more than 1 year ago
Evian Chai
Created by Evian Chai about 4 years ago
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Question Answer
What are the 3 functions of protein in the body? 1. Blood glucose during starvation 2. Protein 3. Special compound synthesis (eg. purines, carnitine, creatine, neurotransmitters)
Why do we need dietary protein? There is no long term storage of protein, as is it constantly degraded and synthesised Dietary protein needed as a result
Amino acids are present in low concentrations in cells/bloodstream that make up the amino acid pool-where does the surplus go? Catabolised into fats/carbs+nitrogen in the urea
What are the 20 essential amino acids? Very Many (Hairy) Little Pigs live In The Toilet (Africa) -Valine, methionine, histidine, lysine, phenylalanine, leucine, isoleucine, threonine, tryptophan, arginine
How many of the essential amino acids are synthesised naturally in the human body? 10
When intake/protein synthesis>excretion/protein breakdown, the nitrogen balance is .... When does this occur? The nitrogen balance is positive Occurs during growth, pregnancy, convalescence
When intake/protein synthesis<excretion/protein breakdown, the nitrogen balance is .... When does this occur? Negative Occurs during starvation, illness, cancer, injury
How are endogenous (most) old/damaged proteins broken down? Via the Uniquitin breakdown system which: - marks them via proteosome - alters location - alters protein interactions/cell activity
How are exogenous proteins (eg. muscle) broken down? What affects the rate of muscle breakdown? 1. Taken into vesicles via endocytosis 2. Vesicles fuse with lysosomes 3. Proteolytic enzymes in lysosome break protein into amino acids Hormones eg. cortisol increase
What are 5 major roles the liver plays in protein metabolism? 1. Remove AA/Glucose/Fats from blood 2. Absorb amino acids to make cellular/plasma proteins, haem/purins, pyrimidines for DNA/RNA 3. Degrade AA 4. Convert NH3 to urea, excreted in kidney 5. Transport of AA/Ammonia
How do the rates of structural/hormonal protein breakdown differ? - Structural protein such as collagen have half lives of years - Hormones & digestive enzymes degrade very rapidly, with half lives of minutes
What are the two ways amino acids are broken down? 1. Transamination 2. Deamination
What occurs during transamination, and what is this process important for? What catalyses this reaction? The amino group on one amino acid is transferred to a carbon skeleton (keto acid) to form a new amino acid Important for creating amino acids not available Aminotransferase
What does an amino acid become once its amino group it removed? Keto group (double bond O replaces amine group)
What occurs during oxidative deamination? Which amino acid (s) are capable of undergoing this? What enzyme catalyses this? The amine group (NH2) is removed as NH3 (ammonia), which then goes to the urea cycle. Leaves behind a keto acid Glutamate Glutamate dehydrogenase
How is glutamate formed? The amino group from... is passed onto ... to form a carbon skeleton (...) and glutamate Glutamate is formed via transamination Alanine Oxologlutarate Pyruvate
What happens to keto acids (formed after amino acids lose amino group)? What are these referred to as? Which two keto acids does this whole process not happen for? First converted to acetyl CoA Then oxidised to CO2/H20 by TCA cycle to provide intermediates Ketogenic Amino acids Lysine and Leucine can only be degraded to acetyl CoA
Glucogenic Amino Acids are called this because They can be converted back to glucose during periods of starvation by becoming pyruvate (Oxo acid)-->TCA Cycle-->Glucose+H20+CO2
How many amino acids are glucogenic? Which two ketogenic amino acids also classify as glucogenic? 13 Phenylalanine and tyrosine
Amino acids are transaminated in muscles and transported in the blood as these 4 amino acids: 1. Alanine, which goes to the liver - removal of amino group from alanine produces pyruvate for glucose/used as acetyl CoA in the TCA cycle 2. Glutamate 3. Glutamine (both 2/3 carry NH3) 4. Aspartate - in urea cycle
What is the role of glutamate/glutamine, and why are they effective? They are carrier proteins for ammonia to the liver, where it will be converted to urea for excretion They are - safe - Glutamine can carry 2 amino groups (2-oxoglutarate <--> glutamate <--> glutamine)
What is NH2 carried in the blood as? Glutamine
What is glutamine's role in pH regulation? Carries ammonia to kidney for pH regulation
What is the equation for the urea cycle? NH4+ + CO2 + 2ATP to NH2CO(P)+ 2ADP+ Pi
What are the 4 end products of nitrogen metabolism? 1. Urea from the urea cycle 2. Creatinine from creatinine phosphate breakdown (high energy phosphate reserve) 3. Uric acid from DNA/RNA breakdown 4. Ammonia from control of body pH
What is the simplified urea cycle? Ornithine-->cirtrulline Citrulline+aspartate-->arginosuccinate via Arginosuccinate-->arginine + fumarate (back into TCA) Arginine-->Urea + ornithine
What can the neurotoxicity of ammonia lead to? Cerebral oedema, coma, death, cell death
What is Hyperammonaemia? What are two things it is caused by? Impaired conversion of NH3 to urea 1. Liver failure - Viral hepatitis - Ischaemia - Liver cirrhosis - Toxins (aflatoxin in moodily peanuts) 2. Genetic defects - Reduction in catalytic activity of any enzyme of the urea cycle - ornithine transcarbamoylase deficiency X linked inheritance (1 in 30,000 live births)
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