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Lectures sept 8- oct 15

Chelsea Scheck cmmb 403 403 English 200 cards

Lectures sept 8- oct 15

Cards in this deck (200)

  1. 1Describe developmental biologyIt is the process of cells differentiating into new or different cells. This process does not stop at birth.
  2. 2What are model organismsThe basic molecular and biochemical tools of development are very similar in all animals, with variations of course to generate different outcomes
  3. 3How to tell the difference between cleavage, gastrulation, and organogenesisCleavage - cell sizes get smaller and there is a synchronous division
    Gastrulation - cells move
    Organogenesis - formation of organs
  4. 4How is the genome translated into functionThe genome contains 25,000 protein coding genes which are transcribed into RNA and then translated into proteins with millions of variants possible.
  5. 5how large is the human genome3 x 10^9 base pairs
  6. 6how do we study how the genome directs proper developmentBy directly removing the function of a gene and studying the result of that on the phenotype of the animal
  7. 7How to determine the developmental function of a gene1. determine where in the embryo the gene is expressed
    2. then you can remove the function of the gene (make a knockout)
    3. people with the mutation can tell you about the function of the gene
  8. 8Describe Holt-Oram syndromeHas a mutation of one copy of TBX5 that codes for a transcription factor. People usually have forelimb and heart defects
  9. 9Define haploinsufficiencyWhen one functional copy of a gene is not enough to provide sufficient protein for normal function
  10. 10what is WISHWhole-mount In Situ Hybridization
  11. 11define fertilizationthe fusion of sperm and egg to produce a zygote
  12. 12define cleavagerapid mitotic divisions
  13. 13define gastrulationcell movements that create the three germ layers
  14. 14define organogenesisproduction of tissues and organs from the germ layers
  15. 15define larval stage(in some species) sexually immature form that must undero metamorphosis to become a sexually mature adult
  16. 16gametogenesisformation and differentiation of germ cells that starts in the embryo, gametes differentiate in the adult
  17. 17what are the axes of the body (up, down, front, back)Anterior
    Posterior
    Ventral
    Dorsal
  18. 18what does the midsaggital plane dividethe body from left and right
  19. 19what does the transverse plane divideacts as a cross section dividing anterior and posterior
  20. 20what does the horizontal plane divideVentral and dorsal
  21. 21when is cleavage synchronouscleavage is synchronous in all cells during the early stages and then it becomes asynchronous
  22. 22what is the vegetal poleend with the highest amount of yolk
  23. 23what is gastrulationwhen the cells start to move in the embryo , defines where the axis of the body is. The three germ layers are also formed (endoderm, ectoderm, mesoderm), but most importantly the notochord forms
  24. 24what are the cells called in the cleavage stageBlastomere - a cell of the cleavage stage embryo
    Morula - cleavage stage embryo when there is no cavity
    Blastula - cleavage stage embryo when there is a cavity (blastocyst stage in mammals)
  25. 25what are the cells called in the gastrulation stageGastrula - cells undergoing gastrulation
  26. 26What are the cells called in the organogenesis stageneurula - when the embryo is forming the neural tube
  27. 27what is the difference between meroblastic cleavage and holoblastic cleavagemeroblastic - the entire egg is not cleaved into cells (incomplete) usually due to large amount of yolk
    holoblastic - the entire egg is cleaved into cells (entire egg becomes part of the embryo) (complete)
  28. 28define cleavagerapid cell divisions divide the zygote cytoplasm into many progressively smaller cells with no increase in total vvolume
  29. 29what happens during organogenesisthe nervous system has been induced and the mesoderm is forming somites
  30. 30what controls metamorphosisthyroid hormones
  31. 31what is the role of yolk in cleavagethe yolk inhibits cleavage
  32. 32what is centrolecithala stage in meroblastic cleavage, in which the yolk is in the center of the egg
  33. 33what structure induces the nervous systemthe notochord
  34. 34what are the two basic cell types in the embryoepithelial cells - attached in a sheet
    mesenchymal cells - individualized cells, individually motile/migratory
  35. 35what is EMTepithelial to mesenchymal transformation (transition)
  36. 36what are the different types of cell movement during gastrulationInvagination
    Involution
    Ingression
    Delamination
    Epiboly
  37. 37what is invaginationit is the infolding of a sheet of cells. It basically is the movement of cells from the outside to the insidewhat is invagination
  38. 38what is involutionIt is the inward movement of the outer layer that spreads over the internal surfacewhat is involution
  39. 39what is ingressionMigration of individual cells (mesenchymal) from the surface to the interiorwhat is ingression
  40. 40what is delaminationthe splitting of one sheet into two or more sheets. (formation of a new sheet of cells)what is delamination
  41. 41what is epibolylayer of cells that spreads and covers another layer thats more inward to the embryowhat is epiboly
  42. 42what are the stages of commitment during developmentspecification
    determination
    differentiation
  43. 43what happens as we go from specification to differentiationpotency decreases
  44. 44what is specificationwhen a cell differentiates by itself (autonomously) and is committed to a given fate, but this commitment can be reversed (until signals or the environment changes)
  45. 45what is determinationthe commitment to a given fate is irreversible, and will continue on its path regardless of its location or placement with other cells
  46. 46what is differentiationdevelopment into a specialized cell, in a biochemical and functional level
  47. 47how to test for specification in a neutral environmentisolating cells and culturing them in a basic medium that doesn't influence development. If they differentiate to a specific cell type they are then specified
  48. 48what is autonomous specificationwhen blastomeres acquire determination factors from the egg cytoplasm
  49. 49what is conditional specificationwhen embryonic cells are specified by signals from their neighbouring cells
  50. 50what are trochoblastsciliated cells
  51. 51what happened in Hans Driesch's demonstration of conditional specificationtook a 4-cell sea urchin embryo, isolated each of the cells, and each cell generated a smaller, but normal, pluteus larva
  52. 52can an embryo have some cells that are conditionally specified and autonomously specifiedyes
  53. 53what happens if you remove cells from an embryothe remaining cells can regulate and compensate for the missing part
  54. 54define fatea cell's future path of differentiation in an undisturbed embryo
  55. 55when can you first make a fate map of an embryothat depends on the species
  56. 56what is a fate mapa representation of an embryo that shows which cells will form what structures or tissues
  57. 57fate maps of vertebrates show what similarities-the notochord forms in a central dorsal position
    -precursors of neural system lie anterior
    -Neural ectoderm surrounded by dorsal ectoderm
  58. 58what is the site of ingressionthe path cells will follow as they migrate from exterior to interior
  59. 59describe autonomous specification of blastomeres(mosaic development)
    isolated blastomere produce only part of the organism, like the tiles of a mosaic.
    The blastomeres are already determined and therefore can't be regulated to form different cells
    can make fate maps at early cleavage stages
    In most invertebrates
  60. 60describe conditional specification of blastomeres(regulative development)
    blastomeres are totipotent
    They can regulate their development to produce a complete organism. If the blastomeres are split into two units, they produce twins. I.e they can alter their fate
    a fate map cannot be made of an early embryo of this type
    The embryo can respond to removal of parts
    in vertebrates and few invertebrates
  61. 61define syncytiuma cytoplasm containing many nuclei. Cell membranes haven't formed between nuclei
  62. 62describe syncytial specificationspecification via interactions between cytoplasmic regions prior to cellularization of the blastoderm
    Both autonomous and conditional specification are seen after cellularization
    what body region forms depends on the ratios (concentration) of nanos to bicoid
    high bicoid = head
    in most insect classes
  63. 63define morphogena long-range signaling molecule that forms a concentration gradient in the embyro and the specification of a cell depends on the concentration of the molecule
  64. 64what is bicoid and caudalThey are morphogens/ transcription factors/ and mRNAs for the head (bicoid) and bottom (caudal)
  65. 65what is the difference between a morphogen and a determinantDeterminant - influences cell fate in the cell in which it is found
    Morphogen - influences the fates of other cells as it diffuses
  66. 66why can bicoid and caudal be a transcription factor and be a signalling moleculebecause they aren't hindered by a cell membrane
  67. 67what are transcription factorsproteins regulating gene expression in which they either bind DNA or other proteins that bind DNA
  68. 68where are transcription factors locatedtypically in the nucleus
  69. 69how does a group of cells in one part of an embryo induce another group of cells to express a specific gene or set of geneswith secreted signals
  70. 70which expression is broader... target genes or mRNAtarget genes
  71. 71since all cells have the same chromosomes how could these chromosomes produce different cell typesthrough differential gene expression, in which only a portion of the genome is expressed in each cell
  72. 72what is SCNTsomatic cell nuclear transfer
    or cloning
  73. 73can determination or differentiation be overcomeyes, by somatic cell nuclear transfer
  74. 74what are pluripotent cellsthose that can form all the cell types of the embryo: ectoderm, mesoderm, and endoderm
  75. 75how is somatic cell nuclear transfer completed-prick oocyte with needle to mimic fertilization
    - remove chromosomes and mitotic spindle
    - donor nucleus inserted into enucleated egg
  76. 76What did John Gurdon's experiments with nuclei from differentiated cells accomplishit showed that nuclei from differentiated cells could be reprogrammed to be pluripotent
    They were able to conclude that there was no loss, inactivation, or permanent change to chromosomal genes, but adults couldn't reach sexual maturity
  77. 77what was the efficiency for the cloning experiments (Dolly) and what was the key to be successfulefficiency was 1 in 434 oocytes
    Use cells that aren't actively dividing as donors and unfertilized eggs as recipients
  78. 78how to clone monkeys with fetal cellsculture of fetal fibroblast + donor enucleated oocyte
    Fusion + activation
    Add histone demethylase
    embryo transfer to surrogate
  79. 79human embryos can be cloned using SCNT to what stageblastocyst stage
  80. 80what are two ways to get pluripotent cellssomatic cell nuclear transfer
    and
    direct reprogramming
  81. 81what is the effect caffeine has on cellsIt keeps cells in the G1 phase, to prevent premature completion of meiosis
  82. 82what does acetylation of histone tails dodisrupt formation of nucleosome assemblages by uncondensing nucleosomes
  83. 83what does methylation of histone tails dostabilize the formation of nucleosome assemblage by condensing nucleosomes
  84. 84what happens when lysine is acetylatedit neutralizes the positive charge, loosening its attraction to DNA, making it more accessible for transcription factors
  85. 85what are polycomb proteinsrepressing proteins
  86. 86what are trithorax proteinsactivating proteins
  87. 87what are methylated lysines of histone tails bounded bypolycomb and trithorax proteins
  88. 88Which methylated lysine residues are associated with gene activation4, 38, 79
  89. 89Which methylated lysine residues are associated with gene repression9 and 27
  90. 90how to produce B-globin and hemoglobin1. transcription of the B-globin gene
    2. Post-translational modification and remove introns
    3. process nuclear RNA to mRNA
    4. translation to encode the B-globin protein
    4. modify and complex with a a-globin and heme to become an active hemoglobin
  91. 91how can a bridge be formed between the enhancer and the promotervia transcription factors, some bind to the enhancer and some to the promoter. Other transcription factors bind to the transcription factors already bound, which forms a loop
  92. 92What transcription factor needs to bind the promoter for the promoter to be usedGATA1
  93. 93which transcription factor forms the link in the bridge between the promoter and enhancerLbd1
  94. 94What is an enhancerA non-coding DNA sequence that binds transcription factors and activates transcription of a gene in cis, some enhancers control the expression of a gene. They are also tissue specific
  95. 95describe enhancer modularitytranscription factors bind to their specific enhancer, recruits the mediator, stabilize RNA PII, modify nucleosomes in the region of the promoter
  96. 96what is able to show where in the body a gene is expressedlacZ reporter gene binds to enhancers and codes for the B-galactosidase, in which its activity produces a blue colour
  97. 97what are some of the major transcription factor familiesHox
    POU
    Lim
    Pax
    Zinc finger
    Sry-Sox
  98. 98what are the three major domains of transcription factorsDNA binding domain
    trans-activating domain
    protein-protein interaction domain
  99. 99What can silence transcriptionDNA methylation on the promoter before the gene
  100. 100Describe MeCP2A binding protein that recognizes methylated cytosines, binds to DNA and recruits either histone deactylase or histone methyltransferases both which promote tight packing of DNA and repress gene expression. It can also recruit Dnmt3
  101. 101What happens if MeCP2 is mutatedIt can cause Rett syndrome
  102. 102what is Rett syndromea severe debilitating neurological disorder that affects girls
  103. 103what are the two DNA methyltransferasesDnmt3 - places methyl group on unmethylated cytosines
    Dnmt1 - recognizes methylated C's on one strand and methylates the C's on the other strand
  104. 104How can a wide variety of proteins be produced from a single geneAlternative splicing
  105. 105What is Dscamit can produce many different proteins through alternative nRNA splicing
  106. 106what are cadherinstransmembrane proteins that segregate cell types in the embryo
  107. 107describe epithelial cellssort by the type of cadherin present
    they can transition to mesenchymal cells (EMT) when E-cadherin is repressed
  108. 108what repressed E-cadherinSLUG transcription factor
  109. 109what are the two signalling pathways for cellsJuxtacrine signalling: membrane receptors bind to proteins in the ECM or directly to other membrane receptors (adjacent)
    Paracrine signalling: long range signalling, in which signaling proteins (ligand) are secreted
  110. 110what is the two types of binding between adjacent cells via receptorshomophilic binding - same proteins (receptors) from each cell
    Heterophilic binding - different proteins (receptors) from each cell
  111. 111describe re-aggregation of cellscells were dissociated and mixed together, they then segregated into their types of cells
  112. 112describe how cells adhere to each otherCadherins from each cell link together while catenins connect the cadherins to actin filaments
  113. 113describe EMTepithelial mesenchymal transition. Epithelial cells usually attached via adherens junction (with cadherin, catenin, actin rings). They are attached to the basal lamina via integrins. Paracrine factors can repress expression of certain cell components, cauing the lose of attachment to basal lamina and adhesion with other cells
  114. 114what is the important of various types of cadherinsTo use the correct type for the correct morphogenesis
    differential cadherin expression is needed for the neural tube to separate from the surface ectoderm
  115. 115what is inductionthe process by which one cell population influences the development of neighbouring cells via interactions at close range
  116. 116in what cases can the optic vesicle not induce lens formation1. if ectoderm is not competent
    2. optic vesicle removed
    3. other tissue than optic vesicle is implanted
  117. 117describe induction of the lens by paracrine factors of the optic vesicleOptic vesicle secretes fgf8 and BMP4 (paracrine factors) that induce synthesis of SOX transcription factors. However, the ectoderm must express Pax6 in order to be competent
  118. 118what is aniridiathe lack of an iris
  119. 119when will you not have lens induction in terms of pax6when pax6 is completely absent in the surface ectoderm
  120. 120can inducer molecules be either paracrine factors or morphogensthey are more often paracrine factors and only some are morphogens
  121. 121what are morphogensdiffusable molecules that determine fate of a cell by their concentration
  122. 122In what ways can induction occurboth juxtacrine and paracrine signalling
  123. 123what are the four most prominent families of paracrine factors during developmentFGFs and RTK ligands
    hedgehog proteins
    WNT proteins
    TGF-B superfamily proteins (BMPs and SMAD1,2,3,5 and Activin, and Nodal)
  124. 124How many different fibroblast growth factors (FGFs) ligands are theremore than 20
  125. 125Describe the RTK signal transduction pathwayThe transmembrane protein (receptor tyrosine kinase (RTK)) gets bound and activated by a FGF, resulting in RTK dimerizing (phosphorylation). SOS adaptor protein then activates GEF, which activates RAS by phosphorylating the bound GDP. GAP then hydrolyses the phosphate bond of RAS, returning it to inactive state. RAS activates FAR, which then activates MEK, which then activates ERK. ERK then alters gene expression by activating/phosphorylating transcription factors
  126. 126In the RTK signal transduction pathway where is each molecule locatedextracellular - Ligand (FGF) and RTK
    Cytoplasm - RTK, SOS, GEF, RAS, RAF, GAP, MEK
    nucleus - ERK, transcription factor
  127. 127Describe the JAK-STAT pathwaygene for casein gets activated
    Prolactin binds/dimerizes the prolactin receptors. The attached JAK2 proteins phosphorylate each other and the dimerized receptors. Activated receptors add a phosphate group to the tyrosine residue (Y) of a STAT5. STAT5 then dimerizes and is translocated to the nucleus, which binds to DNA with other transcription factors and activates transcription of the casein gene
  128. 128what pathways can FGFs activateRTK signal transduction
    and
    JAK-STAT
  129. 129what is thanatophoric dysplasiaa mutation that occurs in the gene for FgfR3 which causes premature activation of the STAT pathway and the production of phosphorylated STAT1 protein. The transcription causes premature termination of chondrocyte cell division
  130. 130What is achondroplasiaHeterozygous gain-of-function of FGFR3 which causes dwarfism. The most common mutation is a glycine to an arginine. The receptor signals in the absence of a ligand
  131. 131Describe the Hedgehog signal transduction pathway when hedgehog bindsHedgehog (ligand) binds to patched protein receptor, which allows for Smoothened to releases Ci or Gli which inactivates the cleavage proteins PKA and Slimb. Ci enters nucleus and acts as a trascriptional activator
  132. 132describe hedgehog signal transduction pathway when hedgehog doesn't bindPatched protein inhibits Smoothened. PKA and Slminb phosphorylate Ci/Gli which then gets cleaved, and then repressed gene expression
  133. 133what is cyclopiawhen hedgehog signaling is inhibited
    creates one eye
  134. 134what is sonic hedgehogs functionnervous system, gut, limb buds
    it also induces the adjacent part of the somites to form vertebrae
  135. 135describe how SHH causes somites to become vertebraeSHH from the notochord induces somites to become sclerotome, which then becomes vertebrae
  136. 136what is Wnt4 necessary forkidney development and female sex determination
  137. 137what happens without wnt4kidneys fail to develop
    Ovary starts producing testosterone and becomes surrounded by a modified male duct system
  138. 138Describe the canonical Wnt pathway when Wnt is boundWnt binds to its receptor, member of the frizzled family and in combination with LRP5/6 and Lgr receptors. Frizzled then activates disheveled which inhibits glycogen synthase kinase 3 (GSK3). Wnt signal frees B-catenin to associate with it's cofactors LEF or TCF and become an active transcription factor
  139. 139Describe the canonical Wnt pathway when Wnt is not boundB-catenin can interact with a complex of proteins (GSK3, APC, and Axin) that target Wnt for protein degredation in the proteasome. GSK3 is also active and prevents the dissociation of B-catenin from the APC protein.
  140. 140describe the non-canonical pathway for WntWnt proteins signal through Frizzled to activate Disheveled, which leads to activation of Rho GTPases (Rac and RhoA). These GTPases coordinate changes in the cytoskeleton and through janus kinase (JNK) to regulate gene expression
  141. 141which pathway includes B-cateninthe canonical pathway of Wnt signaling
  142. 142How many different WNTs are in humans19
  143. 143what is WNT signaling required forplanar cell polarity (PCP)
  144. 144what is planar cell polaritywhen cells are asymmetric within the plane of an epithelium. Polarity along the axis that is perpendicular to the apical/basal axis. This is done through th WNT/PCP pathway
  145. 145what are the major subdivisions of the TGF-B superfamily and what transcription factors do they useBMP's
    and all other members
    SMADs - transcription factors
  146. 146describe the Nodal pathway of the SMAD pathwayActivation complex formed by binding the ligand (TGF-B, activin, nodal) by the type I and II receptors, which then the type II receptor phosphorylates the type I receptor on serine or threonine residues. The type I receptor then phosphorylates SMAD2,3, which dimerizes, complexes with SMAD4, and acts as a transcription factor
  147. 147describe the BMP pathway of the SMAD pathwayActivation complex formed by binding the ligand (BMP) by the type I and II receptors, which then the type II receptor phosphorylates the type I receptor on serine or threonine residues. The type I receptor then phosphorylates SMAD1,5, which dimerizes, complexes with SMAD4, and acts as a transcription factor
  148. 148Describe notch signalingCSL transcription factor is on the enhancer of notch regulated genes and binds repressors of transcription. A ligand (delta, jagged, or serrate) binds to extracellular domain of notch protein of adjacent cell, which changes shape of intracellular domain of notch, which activates a protease. The protease cleaves notch allowing the intracellular region of notch to enter the nucleus and bind the CSL transcription factor. Notch then binds activvators of transcription (p300)
  149. 149what are stem cellscells that divide to replicate themselves and produce daughter cells that can differentiate into other cell types
  150. 150what is potencyThe diversity of cell types that a stem cell can generate
  151. 151what is the most potent stem celltotipotent
  152. 152what is the second most potent stem cellpluripotent
  153. 153what is totipotent stem cellsthey can generate all the cell types of the embryo and extra-embryonic tissues
  154. 154what are the extra-embryonic tissuesplacenta, chorion, amnion, and the yolk sac
  155. 155what is a pluripotent stem cellgenerate all the cell of the embryo, but not the extra-embryonic tissues
  156. 156when are blastomeres totipotent in humansday 2
  157. 157when are inner cell mass cells pluripotentat the blastocyst stage or day 5
  158. 158what is the stem cell concept based onasymmetric cell division
  159. 159What is single-cell asymmetry or asymmetric cell divisionA stem cell that can make more stem cells, while also producing cells that commit to differentiation
  160. 160what is population asymmetry or symmetrical differentiation/renewingStem cell divides symmetrically to produce either two stem cells or two committed cells
  161. 161what is adult stem cell lineageIn many organs, stem cells pass from multipotent stem cells to committed stem cells to a progenitor or transit-amplifying cells to a differentiated cell
  162. 162what are the potency of cells called from most potent to least potent and their cell formtotipotent - zygote
    pluripotent - embryonic
    multipotent - multipotent
    limited differentiation potential - neuronal progenitor
    limited division potential - differentiating neuronal precursors
    functional nonmitotic neuron - differentiated cells
  163. 163Describe HSCsHematopoietic stem cells - blood forming multipotent stem cells. They can divide into either a lymphoid progenitor cell or myeloid progenitor cell
  164. 164what cells can lymphoid progenitor cells becomenatural killer (NK) cells
    T lymphocytes
    B lymphocytes
  165. 165what cells can myeloid progenitor cells becomeNeutrophil
    Basophil
    Eosinophil
    Monocyte/macrophage
    Platelets
    Red blood cells
  166. 166what structure becomes the embryothe inner cell mass
  167. 167what are the three principal cell types in a blastocysttrophectoderm - outer wall
    ICM - mass on the inside
    Primitive endoderm- forms on the ICM
  168. 168where do you get pluripotent embryonic stem cellsfrom blastomeres of the inner cell mass
  169. 169what are two kinds of pluripotent stem cellsblastocysts from the inner cell mass (ICM)
    primordial germ cells
  170. 170what is the difference of Gurdon's method and Yamanak's method to reprogram differentiated cells to a pluripotent stateGurdon's method requires an oocyte
  171. 171what did Yamanaka need to cause differentiated cells to be reprogrammedFour defined factors (all of which are transcription factors) Oct3/4, c-Myc, Sox2, Klf4
  172. 172what are the steps Yamanaka used to reprogram a differentiated celltake the four transcription factors, virally insert them into differentiated fibroblasts, and they will dedifferentiate into induced pluripotent stem cells (iPSCs), which can give rise to the germ layers
  173. 173what are the steps Gurdon took to reprogram a differentiated cellEliminated nucleus of frog egg, replaced it with nucleus of specialized cell from tadpole
  174. 174what is the advantage of iPS cellsthey can be from the patient themselves
    Don't have to use an oocyte or embryo
  175. 175what is the protocol for curing human diseases in a mouse1. take tail-tip fibroblasts are taken (mouse needs to have the human alleles for the disease not mouse alleles)
    2. cells cultured and infected with virus and Yamanaka's transcription factors
    3. iPS cells are given DNA containing wild-type allele of human globin (HbA)
    4. embryos allowed to differentiate
    5. hematopoietic progenitor and stem cells from are injected back into mouse to cure it
  176. 176what are adult stem cellspopulation of stem cells within adult tissue that are continually renewed
  177. 177what is stem cell nichea microenvironment within a tissue that maintains adult stem cells in an undifferentiated state
  178. 178what is the niche of mesenchymal stem cells, hematopoietic stem cells, sparmatogoniabone marrow, adipose tissue, heart, placenta, umbilical cord
    bone marrow
    testes
  179. 179What are villi composed ofmade up of enterocytes (absorptive cells), CBCC (crypt base columnar cells), crypt (indentation of pits)
  180. 180what is anoikisapoptosis when epithelial cells detach from the sheet of villi
  181. 181What are the regions that epithelial cells are divided into in the villusat the base of the crypt is the ISC, then the proliferative zone with transit amplfying cells, and then the differentiation zone with the maturation of epithelial cell types
  182. 182What surrounds the base of the crypt and what is its functionPericryptal stromal cells (mesenchymal cells) - secrete morphogenic gradients of Wnt2b and Bmp4, which regulate stemness and differentiation
  183. 183where is Wnt2b and Bmp4 strongestWnt2b is strongest at base of crypt
    Bmp4 is strongest at tip of crypt
  184. 184what are the differentiated cell types of the small intestine epithelium and what do they doEnterocytes - absorptive cells
    Enteroendecrine cells - produce hormones
    Goblet cells - secrete mucus
    Paneth cells - produce antimicrobial molecules
  185. 185what do paneth cells dosecrete Wnt3a and express DII4, which stimulate proliferation of Lrg5+ CCBC via activation of the notch intracellular domain (NICD)
  186. 186what receptors do CBCC haveA notch receptor, which is a frizzle (canonical process)
  187. 187what is the role of R-spondins (RSPOs) and LGR5LGR5 is the receptor for R-spondins and together prevent the degradation of the frizzled/WNT complex
  188. 188what are the subniches of HSCEndosteal and perivascular
  189. 189what is the endosteal nicheHSCs in the endosteal are adhered to osteoblasts and are long-term. They are typically in the quiescent state. Longer cycles of renewal
  190. 190what is the perivascular nicheHSCs in the perivascular are associated with blood vessels at oxygen rich pores, they are short-term active. Shorter cycles of renewal
  191. 191what is the function of CXCL12/SDF1It is secreted by several cells (CAR and MSCs). Loss of CXCL12 in CAR causes movement of hematopoietic progenitor cells into the bloodstream, whereas loss in MSCs cause reductions in HSCs
  192. 192what is a chimerahalf male half female
  193. 193how are XY sex-reversed females, in what casesdeletion/mutation of SRY
    Haploinsufficiency of SOX9
  194. 194how are XX sex-reversed males, in what casesTranslocation of SRY to another chromosome
    Mutation of Rspo1
  195. 195what forms from the intermediate mesodermthe gonads
  196. 196what are the four main categories of mesodermIntermediate mesoderm, Chorda-mesoderm, paraxial mesoderm, and lateral plate mesoderm
  197. 197what is sex determination dependent onsomatic cells of the gonads
  198. 198what degenerates the mullerian ductAnti-mullerian factor
  199. 199what degenerates the wolffian ductno testosterone
  200. 200what is primary sex determinationspecification and differentiation of the gonads as either ovaries or testes

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403 cmmb 403 Flashcards on Lectures sept 8- oct 15, created by Chelsea Scheck on 10/09/2021.
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