Laboratory Medicine

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Mind map for Danjanov Chapter 1
Jeff Amos
Mind Map by Jeff Amos, updated more than 1 year ago
Jeff Amos
Created by Jeff Amos over 9 years ago
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Resource summary

Laboratory Medicine
  1. Laboratory tests
    1. Routine Tests
      1. on blood and urine
        1. Blood with or without anticoagulants
          1. Serum
            1. no anticoagulant
              1. general usage
                1. defibrinated plasma
                  1. cannot be used to study coagulation factors
                2. Plasma
                  1. EDTA
                    1. Coagulation factors, RBCs, Lipids and lipoproteins
                    2. Lithium Heparin
                      1. General usage
                      2. fluoride oxalate
                        1. glucose, lactate
                  2. Specialized Tests
                    1. sent to specialized reference laboratories
                      1. Examples
                        1. VIP
                          1. PTHrP
                            1. DNA analysis
                              1. Troponin
                            2. Emergency Tests
                              1. samples obtained during surgery or as ER work up
                                1. intraoperative testing of PTH
                                  1. determine if PTH-secreting adenoma was removed
                                2. Qualifications of a "Good" Test
                                  1. Precision
                                    1. same result on same sample every time
                                    2. Accuracy
                                      1. how close measured value is to true value
                                      2. Specificity
                                        1. measures incidence of "true negative"
                                          1. Spec = (TN/(TN+FP)) * 100
                                          2. Sensitivity
                                            1. incidence of true positives
                                              1. Sen = (TP/(TP+FN)) * 100
                                              2. Predictive Value
                                                1. Positive Test
                                                  1. = (TP/(TP + FP)) * 100
                                                  2. Negative Test
                                                    1. = (TN/(TN + FN)) * 100
                                              3. Water and Sodium
                                                1. Water in comparments
                                                  1. Intracellular volume
                                                    1. potassium most important here
                                                    2. Extracellular volume
                                                      1. interstitial compartment
                                                        1. Plasma
                                                          1. sodium most important here
                                                        2. 70 kg man has 4200 mmol Na+
                                                          1. [Na+] ~ 135-145 mmol/L
                                                            1. Depends on Kidneys and hormone
                                                              1. Thirst
                                                                1. ADH
                                                                  1. Aldosterone
                                                                    1. Atrial Natriuretic Peptide
                                                                2. Sodium is a part of...
                                                                  1. Acid-Base balance
                                                                    1. Cell membrane polarity
                                                                      1. Osmolality of body fluids
                                                                        1. Sodium is primary determinant
                                                                          1. Os = (2*Na)+(glu/18)+(BUN/2.8)
                                                                        2. Hyponatremia
                                                                          1. Dilutional
                                                                            1. increased water intake
                                                                              1. infusion of water
                                                                                1. decreased excretion of water
                                                                                  1. Hypoproteinemia
                                                                                    1. Shift of water from cells into ECV
                                                                                      1. SIADH
                                                                                      2. Depletional
                                                                                        1. Gastrointestinal Loss
                                                                                          1. Vomiting, Diarrhea, sequestration of fluid in intestine, fistulas
                                                                                          2. Renal Loss
                                                                                            1. Diabetes mellitus, hypercalcemia, salt-wasting kidney disease, diruetics, Addison's disease
                                                                                            2. Dermal Loss
                                                                                              1. Burns
                                                                                            3. [Na+] < 136 mmol/L
                                                                                              1. Symptoms
                                                                                                1. usually asymptomatic
                                                                                                  1. depressed transmission of neural or neuromusclar signals
                                                                                                2. Hypernatremia
                                                                                                  1. [Na+] > 150 mmol/L
                                                                                                    1. Water Loss
                                                                                                      1. Renal loss of water
                                                                                                        1. Diabetes insipidus (central or nephrogenic), renal tubular necrosis, diuretics
                                                                                                        2. GI loss of Water
                                                                                                          1. Diarrhea, vomiting, nasogastric suction tube, osmotic cathartic agents
                                                                                                          2. Dermal Loss of water
                                                                                                            1. Sweating, burns
                                                                                                          3. Excessive Sodium Intake or Retension
                                                                                                            1. Adrenal cortical lesions
                                                                                                              1. hypercortisolism
                                                                                                              2. Corticosteroids
                                                                                                                1. Infusion of sodium-rich solutions
                                                                                                                2. Frequently from Dehydration
                                                                                                              3. Chloride
                                                                                                                1. Major extracellular anion
                                                                                                                  1. linked to intake, excretion and metabolism of Na+
                                                                                                                  2. [Cl-] ~ 98-106 mmol/L
                                                                                                                    1. Hyperchloremic metabolic acidosis
                                                                                                                      1. depletion of bicarb, replaced by organic anions
                                                                                                                        1. can be filled by Cl-
                                                                                                                          1. no hypernatremia
                                                                                                                      2. Hypochloremic metabolism alkalosis
                                                                                                                        1. loss of Cl- in GI tract, filled with bicarb
                                                                                                                      3. Potassium
                                                                                                                        1. intracellular cation
                                                                                                                          1. [K+]~ 3.5-5.0 mmol/L
                                                                                                                          2. Maintained by Kidneys
                                                                                                                            1. excrete 100 mmol a day
                                                                                                                              1. secreted and diffusion
                                                                                                                                1. aldosterone promotes secretion of K+
                                                                                                                                  1. Cellular States
                                                                                                                                    1. Normal Cell
                                                                                                                                      1. Higher K+ in cell
                                                                                                                                      2. Damaged Cell
                                                                                                                                        1. Hyperkalemia
                                                                                                                                        2. Acidosis
                                                                                                                                          1. Hyperkalemia
                                                                                                                                          2. Alkalosis
                                                                                                                                            1. Hypokalemia
                                                                                                                                          3. Insulin promotes cellular uptake of K+
                                                                                                                                          4. Maintained by Na+/K+ ATPase
                                                                                                                                            1. Hypokalemia
                                                                                                                                              1. increased loss of K+ in urine
                                                                                                                                                1. redistribution of K+ into cells
                                                                                                                                                  1. GI loss
                                                                                                                                                    1. Symptoms
                                                                                                                                                      1. Cardiac Arrhythmias
                                                                                                                                                        1. Neuromuscular
                                                                                                                                                          1. weakness and hypotonia
                                                                                                                                                          2. Slow GI peristalsis
                                                                                                                                                            1. decreased concentrating capacity of the kidneys
                                                                                                                                                          3. Hyperkalemia
                                                                                                                                                            1. reduced excretion
                                                                                                                                                              1. Massive tissue injury or cell lysis
                                                                                                                                                                1. Redistribution from ICV to ECV
                                                                                                                                                                  1. Symptoms
                                                                                                                                                                    1. Cardiac Arrhythmias
                                                                                                                                                                2. Acid Base Balance
                                                                                                                                                                  1. Buffer system
                                                                                                                                                                    1. H+ is buffered using bicarb to maintain constant pH
                                                                                                                                                                      1. Kidneys can regenerate bicarbonate
                                                                                                                                                                        1. Can also remove H+
                                                                                                                                                                      2. Metabolic Acidosis
                                                                                                                                                                        1. accumulation of H+, reduced HCO3
                                                                                                                                                                          1. compensate by exhaling CO2, decreased pCO2
                                                                                                                                                                          2. Loss of bicarb
                                                                                                                                                                            1. DI tract through diarrhea, intestinal, pancreatic, biliary drainage
                                                                                                                                                                            2. inability to excrete H+
                                                                                                                                                                              1. Kidney failure, hypoaldosteronism
                                                                                                                                                                              2. Excessive endogenous acids
                                                                                                                                                                                1. diabetes mellitus
                                                                                                                                                                                2. Ingestion of fixed acids
                                                                                                                                                                                  1. high anion gap (sometimes)
                                                                                                                                                                                    1. adding acid does
                                                                                                                                                                                  2. Metabolic Alkalosis
                                                                                                                                                                                    1. loss of H+ or HCO3 retention
                                                                                                                                                                                      1. reduced breathing
                                                                                                                                                                                      2. ECV contraction
                                                                                                                                                                                        1. Potassium Deficiency
                                                                                                                                                                                          1. Mineralocorticoid Excess
                                                                                                                                                                                          2. Respiratory Acidosis
                                                                                                                                                                                            1. retention of CO2
                                                                                                                                                                                              1. kidneys retain HCO3
                                                                                                                                                                                                1. Excess CO2 is buffered as HCO3
                                                                                                                                                                                                  1. Increased H+ in blood
                                                                                                                                                                                                2. hypoxia
                                                                                                                                                                                                  1. Symptoms
                                                                                                                                                                                                    1. increased blood flow to brain, reduced cardiac output, pulmonary HTN
                                                                                                                                                                                                  2. Respiratory Alkalosis
                                                                                                                                                                                                    1. excessive loss of CO2
                                                                                                                                                                                                      1. increase excretion of HCO3
                                                                                                                                                                                                        1. From hyperventilation
                                                                                                                                                                                                        2. Symptoms
                                                                                                                                                                                                          1. hypocapnia, light headedness, syncope
                                                                                                                                                                                                            1. perioral and peripheral paresthesia
                                                                                                                                                                                                        3. Calcium
                                                                                                                                                                                                          1. Extracellular Ion
                                                                                                                                                                                                            1. Concentration depends on pH of blood, [albumin],
                                                                                                                                                                                                              1. reduce during respiratory alkalosis
                                                                                                                                                                                                              2. [Ca +2] ~ 8.4 - 10.2 mg/dL (2.2-2.6 mmol/L)
                                                                                                                                                                                                                1. Free, protein bound, anion bound
                                                                                                                                                                                                                  1. Albumin and globulins are calcium binding proteins
                                                                                                                                                                                                                  2. increased [protein bound Ca2+]
                                                                                                                                                                                                                    1. Dehydration
                                                                                                                                                                                                                      1. Paraproteinemia
                                                                                                                                                                                                                      2. Hypoalbuminemia
                                                                                                                                                                                                                        1. low total serum calcium with no clinical evidence
                                                                                                                                                                                                                      3. Hypocalcemia
                                                                                                                                                                                                                        1. caused by hypoalbuminemia
                                                                                                                                                                                                                          1. Alkalosis
                                                                                                                                                                                                                            1. less free H+, albumin will bind calcium more
                                                                                                                                                                                                                            2. With hyperphosphatemia
                                                                                                                                                                                                                              1. Hypoparathyroidism
                                                                                                                                                                                                                                1. surgery or DiGeorge Syndrome
                                                                                                                                                                                                                                2. Chronic Renal failure
                                                                                                                                                                                                                                  1. Inadequate Vit D hydroxylation
                                                                                                                                                                                                                                  2. Hypomagnesemia
                                                                                                                                                                                                                                    1. normally help form PTH
                                                                                                                                                                                                                                  3. with hypophosphatemia
                                                                                                                                                                                                                                    1. Inadequate intake of Vit D
                                                                                                                                                                                                                                      1. Rickets
                                                                                                                                                                                                                                        1. Intestinal Malabsorption
                                                                                                                                                                                                                                          1. Renal or Liver Disease
                                                                                                                                                                                                                                            1. Drug related
                                                                                                                                                                                                                                            2. Neonatal
                                                                                                                                                                                                                                              1. Inborn errors of met.
                                                                                                                                                                                                                                              2. Symptoms
                                                                                                                                                                                                                                                1. Neuromuscular numbness, parestheisa, spasms,
                                                                                                                                                                                                                                                  1. abnormal heart rhythm, prolonged QT
                                                                                                                                                                                                                                                    1. Lack of alertness, convulsions, loss of consciousness
                                                                                                                                                                                                                                                      1. laryngeal stridor
                                                                                                                                                                                                                                                    2. Hypercalcemia
                                                                                                                                                                                                                                                      1. Hyperparathyroidism
                                                                                                                                                                                                                                                        1. Primary
                                                                                                                                                                                                                                                          1. parathyroid adenoma or hyperplasia
                                                                                                                                                                                                                                                          2. Secondary
                                                                                                                                                                                                                                                            1. chronic renal disease
                                                                                                                                                                                                                                                            2. Tertiary
                                                                                                                                                                                                                                                              1. becomes independent of [Ca2+]
                                                                                                                                                                                                                                                            3. Neoplasia
                                                                                                                                                                                                                                                              1. malignant tumors
                                                                                                                                                                                                                                                                1. bone metastases
                                                                                                                                                                                                                                                                  1. PTHrP
                                                                                                                                                                                                                                                                    1. Multiple Myeloma and Lymphoma
                                                                                                                                                                                                                                                                    2. Vitamin D intoxication
                                                                                                                                                                                                                                                                      1. Granulomatous Diseases
                                                                                                                                                                                                                                                                        1. TB, sarcoidosis, fungal infections
                                                                                                                                                                                                                                                                      2. Hyperthyroidism
                                                                                                                                                                                                                                                                        1. Usually asymptomatic
                                                                                                                                                                                                                                                                          1. Renal: polyuria, polydipsia, renal calculi, nephrocalcinosis
                                                                                                                                                                                                                                                                            1. Muscle/Skeleton: pain, fractures, weakness,
                                                                                                                                                                                                                                                                              1. Neuro: weakness, fatigue
                                                                                                                                                                                                                                                                                1. GI: abdominal pain, anorexia, constipation
                                                                                                                                                                                                                                                                                  1. Cardio: arrhythmia, ECG, arrest
                                                                                                                                                                                                                                                                              2. Phosphorus
                                                                                                                                                                                                                                                                                1. Mostly in bones and teeth, some inside cells (little in serum)
                                                                                                                                                                                                                                                                                  1. phosphates filtered in kidney are reabsorbed
                                                                                                                                                                                                                                                                                    1. Hypophosphatemia
                                                                                                                                                                                                                                                                                      1. inadequate absorption or increased loss or shiftfrom compartment
                                                                                                                                                                                                                                                                                        1. antiacids may block absorption
                                                                                                                                                                                                                                                                                        2. alkalosis
                                                                                                                                                                                                                                                                                          1. increased insulin
                                                                                                                                                                                                                                                                                            1. Symptoms
                                                                                                                                                                                                                                                                                              1. muscle weakness, cardiac arrhythmia, confusion
                                                                                                                                                                                                                                                                                                1. reduction of 2,3-diphosphoglycerate in RBC
                                                                                                                                                                                                                                                                                              2. Hyperphosphatemia
                                                                                                                                                                                                                                                                                                1. chronic renal failure preventing excretion
                                                                                                                                                                                                                                                                                                  1. reduces calcium
                                                                                                                                                                                                                                                                                                  2. Massive Cell Lysis
                                                                                                                                                                                                                                                                                                    1. Leads to hypocalcemia and metastatic calcification
                                                                                                                                                                                                                                                                                                  3. Proteins
                                                                                                                                                                                                                                                                                                    1. plasma proteins mostly from the liver
                                                                                                                                                                                                                                                                                                      1. Immunoglobulins are the exception
                                                                                                                                                                                                                                                                                                      2. Albumin and Globulin
                                                                                                                                                                                                                                                                                                        1. 3:1 ratio normally
                                                                                                                                                                                                                                                                                                        2. Electrophoresis
                                                                                                                                                                                                                                                                                                          1. will separate into 5 bands
                                                                                                                                                                                                                                                                                                            1. fetal and newborn blood have 6
                                                                                                                                                                                                                                                                                                              1. prealbumin
                                                                                                                                                                                                                                                                                                          2. Albumin
                                                                                                                                                                                                                                                                                                            1. oncotic protein in blood
                                                                                                                                                                                                                                                                                                              1. buffer
                                                                                                                                                                                                                                                                                                                1. source of amino acids for other proteins
                                                                                                                                                                                                                                                                                                                  1. transport protein for calcium, FFA, bilirubin, hormones, drugs, etc
                                                                                                                                                                                                                                                                                                                    1. antioxidant
                                                                                                                                                                                                                                                                                                                      1. regulator of capillary permeability
                                                                                                                                                                                                                                                                                                                      2. Others
                                                                                                                                                                                                                                                                                                                        1. alpha1-globulin
                                                                                                                                                                                                                                                                                                                          1. alpha-antitrypsin
                                                                                                                                                                                                                                                                                                                            1. serine protease inhibitor
                                                                                                                                                                                                                                                                                                                            2. alpha fetoprotein
                                                                                                                                                                                                                                                                                                                              1. major fetal protein,
                                                                                                                                                                                                                                                                                                                            3. alpha2-globulin
                                                                                                                                                                                                                                                                                                                              1. alpha2-macroglobulin
                                                                                                                                                                                                                                                                                                                                1. protease inhibitor
                                                                                                                                                                                                                                                                                                                                  1. increase in nephrotic syndrome
                                                                                                                                                                                                                                                                                                                                  2. haptoglobin
                                                                                                                                                                                                                                                                                                                                    1. binds free hemoglobin
                                                                                                                                                                                                                                                                                                                                    2. ceruloplasmin
                                                                                                                                                                                                                                                                                                                                      1. ferroxidase activity, transports copper and iron
                                                                                                                                                                                                                                                                                                                                        1. acute phase protein
                                                                                                                                                                                                                                                                                                                                      2. beta-globulin
                                                                                                                                                                                                                                                                                                                                        1. transferrin
                                                                                                                                                                                                                                                                                                                                          1. iron-transporting protein
                                                                                                                                                                                                                                                                                                                                          2. complement factors C3 and C4
                                                                                                                                                                                                                                                                                                                                            1. inflammatory and immune reaction
                                                                                                                                                                                                                                                                                                                                            2. B2-microglobulin
                                                                                                                                                                                                                                                                                                                                              1. light chain of class 1 leukocyte antigen
                                                                                                                                                                                                                                                                                                                                              2. Fibrinogen
                                                                                                                                                                                                                                                                                                                                                1. coagulation when fibrin
                                                                                                                                                                                                                                                                                                                                              3. gamma-globulin
                                                                                                                                                                                                                                                                                                                                                1. immunoglobins
                                                                                                                                                                                                                                                                                                                                                  1. C-reactive protein
                                                                                                                                                                                                                                                                                                                                                    1. present during infection, rheumatoid arthritis, etc.
                                                                                                                                                                                                                                                                                                                                                2. Diagnostic Proteins
                                                                                                                                                                                                                                                                                                                                                  1. Aminotransferases
                                                                                                                                                                                                                                                                                                                                                    1. Aspartate aminotransferase
                                                                                                                                                                                                                                                                                                                                                      1. Alanine Aminotransferase
                                                                                                                                                                                                                                                                                                                                                        1. leak out of damaged livers
                                                                                                                                                                                                                                                                                                                                                        2. Alkaline phosphatase
                                                                                                                                                                                                                                                                                                                                                          1. healthy: from bone
                                                                                                                                                                                                                                                                                                                                                            1. marker of biliary obstruction
                                                                                                                                                                                                                                                                                                                                                            2. Lactate Dehydrogenase
                                                                                                                                                                                                                                                                                                                                                              1. high in neoplastic states
                                                                                                                                                                                                                                                                                                                                                                1. cell damage
                                                                                                                                                                                                                                                                                                                                                                2. Creatine Kinase
                                                                                                                                                                                                                                                                                                                                                                  1. muscle injury
                                                                                                                                                                                                                                                                                                                                                                    1. CK-MB in myocardial infarction
                                                                                                                                                                                                                                                                                                                                                                    2. Blood Urea Nitrogen
                                                                                                                                                                                                                                                                                                                                                                      1. high in renal failure, shock, volume depletion
                                                                                                                                                                                                                                                                                                                                                                        1. GI bleeding, stress, drugs, corticosteroids
                                                                                                                                                                                                                                                                                                                                                                          1. Low: starvation, liver failure, polyuria,
                                                                                                                                                                                                                                                                                                                                                                          2. Creatinine
                                                                                                                                                                                                                                                                                                                                                                            1. kidney failure
                                                                                                                                                                                                                                                                                                                                                                        2. Lipids and Lipoproteins
                                                                                                                                                                                                                                                                                                                                                                          1. complexed with apoproteins in whater
                                                                                                                                                                                                                                                                                                                                                                            1. chylomicrons, VLDL, LDLs, HDLs
                                                                                                                                                                                                                                                                                                                                                                            2. Hyperlipidemia
                                                                                                                                                                                                                                                                                                                                                                              1. primary (genetic)
                                                                                                                                                                                                                                                                                                                                                                                1. elevation of cholesterol and TGs
                                                                                                                                                                                                                                                                                                                                                                                2. secondary dislipoproteinemias
                                                                                                                                                                                                                                                                                                                                                                                  1. from diabetes, obesity, alcoholism, hypothyroidism, nephrotic syndrome, biliary obstruction, antihypertensive drugs
                                                                                                                                                                                                                                                                                                                                                                              2. Carbohydrates
                                                                                                                                                                                                                                                                                                                                                                                1. stored as glycogen
                                                                                                                                                                                                                                                                                                                                                                                  1. Hyperglycemia
                                                                                                                                                                                                                                                                                                                                                                                    1. Diabetes Mellitus
                                                                                                                                                                                                                                                                                                                                                                                    2. Hypoglycemia
                                                                                                                                                                                                                                                                                                                                                                                      1. overtreatment of diabetes
                                                                                                                                                                                                                                                                                                                                                                                    Show full summary Hide full summary

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