Physical Modifications

Beschreibung

Structural Basis for Biological Function (Protein Modifications) Quiz am Physical Modifications, erstellt von gina_evans0312 am 21/12/2013.
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Zusammenfassung der Ressource

Frage 1

Frage
Physical modifications are reversible
Antworten
  • True
  • False

Frage 2

Frage
Give an example of protein oxidation
Antworten
  • Disulphide bond formation
  • Hydrogen bond formation
  • Glycosylation

Frage 3

Frage
Where are proteins with oxidated modifications are nearly universally found where?
Antworten
  • Outside the cell
  • The cytoplasm
  • Nucleus
  • I.e. Oxidative environments

Frage 4

Frage
What is so useful about disulphide bonds?
Antworten
  • They're heat stable
  • They're protease resitant
  • They're structurally resilient

Frage 5

Frage
Where do oxidation reactions occur?
Antworten
  • The golgi
  • The ER
  • The ribosome

Frage 6

Frage
Disulphide bonds assist in recovery from denaturation
Antworten
  • True
  • False

Frage 7

Frage
In Maristoylation, what is added?
Antworten
  • Maristic acid
  • Maristoylate
  • Maristoyl-3-phosphate

Frage 8

Frage
Describe the substrate added in Myristoylation
Antworten
  • 4C
  • 5C
  • 6C
  • Saturated & hydrophobic
  • Unsaturated & hydrophilic

Frage 9

Frage
What is the point of Myristoylation?
Antworten
  • It polarises a protein
  • It binds a protein to a membrane
  • It binds two ends of a protein together

Frage 10

Frage
What sequence is the Myristoylation substrated added to?
Antworten
  • The N-terminus
  • The C-terminus
  • MGXXX(T/S)
  • MPXXX(G/F)
  • SDXXX(S/R)

Frage 11

Frage
The protein that performs Myristoylation is N-Myristoyl transferase
Antworten
  • True
  • False

Frage 12

Frage
How is the Myristoylation substrate added?
Antworten
  • First the phenylalinine is removed
  • First the methionine is removed
  • First the tyrosine is removed
  • Then the substrate is added to the glycine
  • Then the substrate is added to the leucine
  • Then the substrate is added to the isoleucine

Frage 13

Frage
Prenylation is the addition of ketones
Antworten
  • True
  • False

Frage 14

Frage
Name the two substrates most often added in prenylation
Antworten
  • Farnesyl
  • Geranylgeranyl
  • Derisyl
  • Nitrosyl

Frage 15

Frage
Where does prenylation occur?
Antworten
  • In a CAAX box (where A should be Alanine, but anything small and hydrophobic will do)
  • In a FAAX box (where A should be Isoleucine, but anything small and hydrophobic will do)
  • In a CAAT box (where A should be Alanine, but anything small and hydrophobic will do)

Frage 16

Frage
In prenylation, the X of the sequence must be the terminal aa of the chain
Antworten
  • True
  • False

Frage 17

Frage
Put the following in order A- The COOH group is modified to a methyl group to make it uncharged B- The substrate is added to the cystine C- The last three aa are removed
Antworten
  • A-C-B
  • B-C-A
  • A-B-C

Frage 18

Frage
Prenylation is done to proteins destined for the cytoplasm
Antworten
  • True
  • False

Frage 19

Frage
Name the types of glycosylation
Antworten
  • N-linked
  • O-linked
  • C-Mannosylation
  • Phosphoserine Linked

Frage 20

Frage
Glycosylation is the addition of carbohydrate chains
Antworten
  • True
  • False

Frage 21

Frage
What is the site of N-linked glycosylation?
Antworten
  • The Asn in an NX(S/T)
  • The Phe in an FX(S/T)
  • The Gly in a GX(S/T)

Frage 22

Frage
What is the residue that is attached to the amino acid?
Antworten
  • Mannose
  • Glucose
  • N-acetyl-galactosamine
  • N-acetyl glucosamine

Frage 23

Frage
What residues are on the tips of the branches?
Antworten
  • Mannose
  • Glucose
  • Fructose

Frage 24

Frage
If the branches end with mannose, what is the process called?
Antworten
  • High-mannose Biantennary N-glycosylation
  • High-mannose N-glycosylation
  • Mannosylation

Frage 25

Frage
Why are 3 glucose added to the sugar complex in the golgi?
Antworten
  • So they can be removed as markers for protein folding and transport
  • So the Golgi knows they're bound for the membrane
  • So the Golgi can degrade the protein as faulty

Frage 26

Frage
Why is it called High-Mannose Biantennary N-Glycosylation?
Antworten
  • Because one of the three branches is removed, giving two 'antenna'
  • Because another branch is formed off the first one, giving two 'antenna'
  • Because proteins with this type of glycosylation act as receptor proteins with two antenna

Frage 27

Frage
Once the Biantennary complex has been formed, what happens next?
Antworten
  • Mannose is removed
  • Addition of N-acetyl neuraminic acids
  • Addition of glucose
  • Removal of N-acetyl glucosamine
  • Addition of a fucose to the GlcNac bound to the amino acid

Frage 28

Frage
Why the complicated process of adding and removing sugars?
Antworten
  • It adds a date stamp to the cell- over time the NeuAc's fall off, which signals the protein for degredation
  • It adds a transport signal- depending on what is added or removed, proteins are directed to different areas by carrier proteins
  • It's quality control- the contortions required to add and remove all the sugars mean that the protein has folded properly

Frage 29

Frage
The HIV virus can use glycosylation to hide from the immune system
Antworten
  • True
  • False

Frage 30

Frage
Why is N-linked glycosylation potentially dangerous?
Antworten
  • Because the immune system is programmed to ignore it, viral coat proteins can use it to hide the virus
  • Because NeuAc's can be toxic in high concentrations
  • Because the removal of mannose can cause the protein to misfold

Frage 31

Frage
HIV1-gp120 has many N-X-(T/S) sequences to be glycosylated
Antworten
  • True
  • False

Frage 32

Frage
Where does HIV1-gp120 bind?
Antworten
  • CD4 receptor
  • CD8 receptor
  • B-lymphocyte receptors

Frage 33

Frage
How does the HIV virus invade the lyphocyte?
Antworten
  • It's only glycosylated on a very small binding site
  • It's only not glycosylated on a very small binding site
  • Which allows it to bind and invade
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