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Nitrogen Metabolism 2
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Questions in this quiz (18)
1So ammonia [blank_start]assimilation[blank_end] is the incorporation of [blank_start]inorganic[blank_end] nitrogen (NH3) into one amino acid; [blank_start]glutamate[blank_end]
- but what about the other amino acids
- there are [blank_start]20[blank_end] amino acids?
[blank_start]Transamination[blank_end] = the transfer of an [blank_start]amino[blank_end] group from one compound to another
- NH2 (amino group) is transferred from an amino acid to a [blank_start]keto[blank_end] acid to form a new amino acid
- the enzyme catalysing the reactions are called [blank_start]transaminases[blank_end] or aminotransferases
- [blank_start]Pyridoxal[blank_end] phosphate (PP) acts as a coenzyme to transfer the NH2 ([blank_start]amino[blank_end] group)
- transamination allows (all) [blank_start]plants[blank_end] and some microogranisms to synthesise all the [blank_start]amino[blank_end] acids they require
- [blank_start]animals[blank_end] cannot synthesise all amino acids
so: enzyme = transaminases or [blank_start]aminotransferases[blank_end] but they don't work alone they need a coenzyme, pyridoxal [blank_start]phosphate[blank_end] (PP)- Aassimilation
- Binorganic
- Cglutamate
- D20
- ETransamination
- Famino
- Gketo
- Htransaminases
- IPyridoxal
- Jamino
- Kplants
- Lamino
- Manimals
- Naminotransferases
- Ophosphate
2How
1. amino group from an [blank_start]amino[blank_end] acid is transferred to [blank_start]pyridoxal[blank_end] phosphate (the coenzyme on the enzyme)
2. this makes a [blank_start]keto[blank_end] acid and pyridoxal [blank_start]phosphate[blank_end] bound to the enzyme with the amino group
3. in the second reaction the enzyme-PP-NH2 reacts with a [blank_start]different[blank_end] keto acid; the amino group is transferred to the new keto acid
this can be simplified to
amino acid 1 + keto acid 2 --> amino acid 2 + keto acid 1
- in the presence of as [blank_start]transaminase[blank_end] / aminotransferase enzyme
We have moved an amino group from an amino acid to keto group- Aamino
- Bpyridoxal
- Cphosphate
- Dketo
- Edifferent
- Ftransaminase
3- [blank_start]Glutamate[blank_end] (amino acid) is the primary source of NH2
- the NH2 (amino group) is transferred to an appropriate/specific [blank_start]keto[blank_end] acid and new amino acids are either formed directly or have further metabolism to produce related amino acids
pyruvate + glutamate --> [blank_start]alanine[blank_end]
3-phosphoglycerate (3PGA) + glutamate --> [blank_start]serine[blank_end]
oxaloacetate + glutamate --> [blank_start]aspartate[blank_end]- Aalanine
- Baspartate
- Cserine
- DGlutamate
- Eketo
4Intermediates of carbohydrate and lipid metabolism are the source of the keto acids for amino acid synthesis
- ATrue
- BFalse
5Keto acids are coming from the metabolites of [blank_start]central[blank_end] metabolism in transamination
- some amino acids are steps to make other [blank_start]amino[blank_end] acids
- some are not steps- Acentral
- Bamino
6[blank_start]Essential[blank_end] Amino Acids = amino acids that [blank_start]cannot[blank_end] be synthesised and must be obtained from [blank_start]diet[blank_end] or growth media
- non-essential amino acids are synthesised by [blank_start]simple[blank_end] pathways
- [blank_start]essential[blank_end] amino acids are synthesised by more complicated pathways
- [blank_start]plants[blank_end] and some microorganisms can synthesise all [blank_start]20[blank_end] amino acids- AEssential
- Bcannot
- Cdiet
- Dsimple
- Eessential
- Fplants
- G20
7Non-essential amino acids
- alanine
- arginine
- asparagine
- aspartate
- cysteine
- [blank_start]glycine[blank_end]
- glutamine
- glutamate
- serine
- proline
- [blank_start]tyrosine[blank_end]
non-essential amino acids [blank_start]can[blank_end] be synthesised by mammals, as they require [blank_start]simple[blank_end] pathways
essential amino acids [blank_start]cannot[blank_end] be synthesised by mammals and must be obtained from the diet
- essential have [blank_start]5[blank_end] or more steps in their pathway- Aglycine
- Btyrosine
- Ccan
- Dsimple
- Ecannot
- F5
8Amino Acid Degradation
- animals may consume [blank_start]amino[blank_end] acids in excess of the requirements (too much)
- excess amino acids cannot be stored so they have to be [blank_start]degraded[blank_end]
- degradation takes place in 2 stages
1. [blank_start]deamination[blank_end]
2. [blank_start]oxidative[blank_end] deamination
[blank_start]Plants[blank_end] and microorganisms synthesise amino acids to meet their specific requirements, so they don't degrade them in the same way
[blank_start]Microorganisms[blank_end] degrade amino acids during the process of decay which is the final part of the [blank_start]organic[blank_end] nitrogen cycle (decomposing)- Aamino
- Bdegraded
- Coxidative
- Ddeamination
- EPlants
- FMicroorganisms
- Gorganic
9[blank_start]Degradation[blank_end] of Amino Acids
1. [blank_start]Deamination[blank_end] = the reverse of transamination
> the NH2 (amino group) from the amino acid being degraded is transferred to 2-oxo-[blank_start]glutarate[blank_end] to form glutamate; [blank_start]glutamate[blank_end] is a very valuable amino acid
2. [blank_start]Oxidative[blank_end] (O) deamination = reverse of ammonia [blank_start]assimilation[blank_end]
> the [blank_start]NH2[blank_end] (amino group) of glutamate is removed by glutamate [blank_start]dehydrogenase[blank_end]- ADegradation
- BDeamination
- Cglutarate
- Dglutamate
- EOxidative
- Fassimilation
- Gdehydrogenase
- HNH2
10Amino acid degradation example = [blank_start]alanine[blank_end]
1. amino group (NH2) from alanine is transferred to 2-[blank_start]oxo[blank_end]-glutarate to form [blank_start]glutamate[blank_end] + pyruvate (keto acid)
2. the [blank_start]amino[blank_end] group of glumate is removed by glutamate [blank_start]dehydrogenase[blank_end]
- this reduces NAD --> [blank_start]NADH[blank_end]
but what happens to the keto acids we from during deamination?- Aalanine
- Boxo
- Cglutamate
- Damino
- Edehydrogenase
- FNADH
11The [blank_start]keto[blank_end] acids formed during deamination feed into central [blank_start]metabolic[blank_end] pathways
- they are glucogenic is they can be used as a substrate for [blank_start]glucose[blank_end] synthesis
- they are [blank_start]ketogenic[blank_end] if they can be used to synthesise ketone bodies
So: we get amino acids from metabolites of the central pathways and they if they are degraded, they feed back into pathways of [blank_start]central[blank_end] metabolism
FACT: the amino acids that give rise to [blank_start]pyruvate[blank_end] can contribute to both the [blank_start]glucogenic[blank_end] and ketogenic pathways depending on how the pyruvate is used- Aketo
- Bmetabolic
- Cglucose
- Dketogenic
- Ecentral
- Fpyruvate
- Gglucogenic
12In animals we [blank_start]cannot[blank_end] excrete ammonia, we need to go through the [blank_start]urea[blank_end] cycle
> the NH3 (ammonia) formed by [blank_start]oxidative[blank_end] deamination is potentially toxic to animals so much convert it to [blank_start]urea[blank_end] which is non-toxic and then excrete it through the [blank_start]kidneys[blank_end] in the urine
- the urea cycle happens in the [blank_start]liver[blank_end] and is then taken to the kidneys
- the products of oxidative [blank_start]deamination[blank_end] = NH3 and NADPH
- NH3 ([blank_start]ammonia[blank_end]) is converted to urea
- each molecule of urea excretes [blank_start]2[blank_end] molecules of ammonia
Birds and most reptiles excrete [blank_start]uric[blank_end] acid
- most fish excrete [blank_start]ammonia[blank_end]- Acannot
- Burea
- Coxidative
- Durea
- Ekidneys
- Fliver
- Gdeamination
- Hammonia
- I2
- Juric
- Kammonia
13Urea Cycle
- urea is produced by the [blank_start]urea[blank_end] cycle which only takes place in the [blank_start]liver[blank_end]
- there are 5 steps to produce urea from [blank_start]ammonia[blank_end]
- amino acid degradation occurs in the [blank_start]liver[blank_end] too, so that is why the urea cycle also occurs in there- Aurea
- Bliver
- Cammonia
- Dliver
14Urea cycle: step 1; occurs in the [blank_start]mitochondria[blank_end] of the liver
- ammonia combines with [blank_start]bicarbonate[blank_end] --> [blank_start]carbamoyl[blank_end] phosphate
- reaction requires [blank_start]2[blank_end]ATP; one for energy, one for phosphate group
- enzyme = carbamoyl phosphate [blank_start]synthetase[blank_end]- Acarbamoyl
- Bbicarbonate
- Cmitochondria
- D2
- Esynthetase
15Urea cycle: step 2
- takes place in [blank_start]mitochondria[blank_end] of liver
- carbamoyl [blank_start]phosphate[blank_end] + ornithine --> [blank_start]citrulline[blank_end] + Pi
- enzyme = [blank_start]ornithine[blank_end] transcarbamoylase
- citrulline then moves out of the [blank_start]mitochondria[blank_end] into the cytoplasm where the rest of the cycle takes place
- the carbamoyl group joins with [blank_start]ornithine[blank_end] and phosphate if left, citrulline can then leave the [blank_start]mitochondria[blank_end]
ornithine and [blank_start]citruline[blank_end] are amino acids but do not take part in [blank_start]protein[blank_end] synthesis- Amitochondria
- Bphosphate
- Ccitrulline
- Dornithine
- Emitochondria
- Fornithine
- Gmitochondria
- Hcitruline
- Iprotein
16Urea cycle: step 3
- takes place in [blank_start]cytoplasm[blank_end]
- citrulline combines with [blank_start]aspartate[blank_end] (another amino acid) to form arginosuccinate
- requires energy from atp > atp is hydrolysed to [blank_start]AMP[blank_end]
- enzyme = synthase- Acytoplasm
- Baspartate
- CAMP
17Urea cycle: Step 4
- [blank_start]Arginosuccinate[blank_end] splits to produce arginine and [blank_start]fumarate[blank_end] (3rd to last step of TCA)
- fumarate then goes to [blank_start]TCA[blank_end] cycle to generate energy
- enzyme = lyase- AArginosuccinate
- Bfumarate
- CTCA
18Urea cycle: step 5
- arginine + water --> urea + [blank_start]orthinine[blank_end]
- [blank_start]arginine[blank_end] is broken down to urea and orthinine by arginase
- urea is excreted by the [blank_start]kidneys[blank_end]
- ornithine is shuttled back into the [blank_start]mitochondria[blank_end] for use in the urea cycle
When urea is excreted it can be broken down to release ammonia by [blank_start]microorganisms[blank_end]
- enzyme = urease
Urea + water --> [blank_start]urease[blank_end] --> carbon [blank_start]dioxide[blank_end] and [blank_start]ammonia[blank_end]- Aorthinine
- Barginine
- Ckidneys
- Dmitochondria
- Emicroorganisms
- Furease
- Gdioxide
- Hammonia
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- Biochemistry Quiz on Nitrogen Metabolism 2, created by sophie waddington on 18/05/2018.
- Author
- sophie waddington
- Language
- English
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